Dear all,
Subject- To find number of hits available for the particular consensus sequence in bacterial genome
I am having this consensus sequence
GAAUGUCUUCGGGGCAGGGUGAGGAGRGNNNNNNNNNNNNHNCVGGGNNNUGGUGNNNNNNNNNNNCNDNNGNDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNRYSYDRRRNNNNNNNNNNNNNNNNNNUNNNANNCNCGNNNVCCRACVGUNNNANNNVBDNNBAUKYUHNNDNNYNNVNNBNNNVAGUCNGGAUGKNNANDNNNNNNNNNNNDRGGAGAAGGAGGCA
i need to perform an online BLAST with a bacterial genome. Don't know how to do it