Hello,
I am currently trying to use megablast on a Galaxy server. I use a custom db that I prepared with makeblastdb -in some_sequences.fasta -dbtype nucl -out some_sequences. I put the path to my database in galaxy-dist/tool-data/blastdb.loc, I restarted my Galaxy server, but when I want to perform a megablast, the following error is raised ;
Cannot execute megaablast. BLAST Database error: No alias or index file found for nucleotide database [/home/john/databases/database_name/some_sequences] in search path [/home/john/galaxy-dist/database/job_working_directory/000/119::]
what have I done wrong?
thanks