Quantcast
Viewing all articles
Browse latest Browse all 41826

Problems In Creating Pssm Using Psiblast

Hi, Everyone.

Recently I am using PSIBlast to create PSSM.

Command seems like this:

psiblast -subject oneseq.fasta -inmsa alignment.fasta -outascii_pssm pssm.txt

The problems is

Error: NCBI C++ Exception: "/am/ncbiapdata/release/blast/src/2.2.25/IntelMAC-universal/c++/GCC401-ReleaseMT--IntelMAC-universal/../src/util/sequtil/sequtilconvertimp.cpp", line 225: Error: ncbi::CSeqConvert_imp::Convert() - Unknown conversion.

I have tried several times and did not figure out this problem.

Could anyone can help me to solve this problem?

Great thanks.


Viewing all articles
Browse latest Browse all 41826

Trending Articles