Hi everyone. I am working with RFAM. It is blocked in some line with three different commands.
perl rfam_scan.pl -blastdb Rfam.fasta Rfam.cm 200pb_Pamicro.fasta --nobig -o rfam_200_nobig.out
Died at rfam_scan.pl line 281, <GEN1> line 1128517.
perl rfam_scan.pl -blastdb Rfam.fasta Rfam.cm 200pb_Pamicro.fasta --bt 0.05 -o rfam_200_0.05.out
Died at rfam_scan.pl line 281, <GEN1> line 1128532.
perl rfam_scan.pl -blastdb Rfam.fasta Rfam.cm 200pb_Pamicro.fasta -o rfam_200.out
Died at rfam_scan.pl line 281, <GEN1> line 1129117.
What will you do in my same situation? Do you find some mistake in this line? I am going to send a email to the rfam-help@ebi.ac.uk too.
See you.