we want to get a formated database for BLAST from Uniref90. we referred an article which used an early release Uniref90, say version 10.0 ftp.uniprot.org only provide the XML format of this version. (xml file available: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release10.0/uniref/uniref10.0.tar.gz) How can we convert XML uniref90.xml to uniref90.fasta ? or, can formatdb take XML file as input file? Thanks!
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