HI,
I have this list of proteins from a new genome project so its pretty much unannotated. However, its closely related to C. elegans so i was thinking of trying to identify the closest C. elegans homologues.
what i've been doing right now is doing a protein blast in ncbi with the protein sequences and then taking the top C. elegans hit, however, there are far too many sequences to be able to do this one at a time, so I was wondering if theres a way to do it faster/automated/program that does it for me.
Thanks!