Quantcast
Channel: Post Feed
Viewing all articles
Browse latest Browse all 41826

Convert Blast m8 output to XML

$
0
0

I've used usearch's ublast feature on my datasets. I'm now wanting to use a package such as findorf on them. However, this requires XML formatted data, which usearch does not support as output. I have my files in a tab separated file, equivalent to NCBI blast m8 format. How can I go about converting these to XML? I've been searching around for a script, but haven't been able to find one. This doesn't seem like it's a very common task.


Viewing all articles
Browse latest Browse all 41826

Trending Articles