Hi!
if a have such a result from a blast run, how can i understand if its in the 5' or 3' side of the DNA or protein strand ?
> gnl|SRA|SRR456295.4505.2 FIHSSUW02H237H.2 length=250 Length=250 Score = 129 bits (324), Expect = 1e-33, Method: Composition-based stats. Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 0/78 (0%) Frame = +1 Query 203 RRMTLLLGPPGSGKTTLLLALAGRLNKDLKFSGQVTYNGHQMDEFVPQRTAAYISQHDLH 262 R L GPP SGKTTLL+ALAG L K+LK SG+VTYNGH++ EFVP+RTAAYISQ+DLH Sbjct 16 REWPLRPGPPSSGKTTLLMALAGTLAKELKSSGKVTYNGHELHEFVPERTAAYISQNDLH 195 Query 263 IGEMTVRETLAFSARCQG 280 IGEMTVRETLAFSARCQG Sbjct 196 IGEMTVRETLAFSARCQG 249
Thank you