Hi - does anyone know of a script that allows for a blast result to be filtered by the minimum total coverage of the query/subject that the alignment/s represent?
I'm imagining a script that calculates the total length of all HSPs between a query and a subject and then compares that to the length of the query and subject sequences. I'll write the script myself if I have to but I would have thought someone would have done it already.
Cheers,
Tim